namd Available versions: ~*2.6!f ~2.7!f Homepage: http://www.ks.uiuc.edu/Research/namd/ Description: A powerful and highly parallelized molecular dynamics code
tinker Available versions: ~*4.2-r1 {X debug} Homepage: http://dasher.wustl.edu/tinker/ Description: TINKER is a molecular modeling package that includes force fields for handing large molecules and large systems, such as AMBER and CHARMM. A Java based visualization front end is included.